Networks

Reaction network derived properties

propensities()

Propensity functions

updates()

Update functions

stmat()

Stoichiometric matrix

deriv()

Derivative function

latex()

LaTeX representation of a network

Parsing

Reaction network and network component parsing

parse_network() network()

Create a reaction network

parse_reaction()

Create a reaction

parse_species()

Create a species

Compiling

compile()

Compiles a reaction network to a C++ object

Examples

network_examples()

Example networks

network_string_examples()

Example network strings

S3 methods

species()

species

rates()

rates